≡   PeptideAtlas Links Seattle Proteome Center

PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Atlas Data: Data Repository HPPP Data Central PeptideAtlas Builds PeptideAtlas Exports THISP Search Database
Contribute Data

Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search

Glossary/Terms: Atlas nomenclature Protein ID terms

LOG IN
MENU
Log In
Full 2021-01 Build Summary
5datasets
13experiments
788MS runs
1,193,640PSMs
41,043distinct peptides
1,165canonical proteins

About

The Bartonella henselae PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets.

Available datasets of Bartonella henselae samples were reprocessed from the raw files using the Trans-Proteomic Pipeline suite of tools.

Explore

SEARCH
form...

Download

Below are individual Bartonella henselae PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build. A build subtitled "PSM FDR=0.002" denotes a PSM FDR threshold of 0.002 (0.2%) is applied to every sample in the build.

Bartonella henselae 2021-01 PSM FDR = 0.0001Latest Build
  • Biosequence Set in FASTA format [1MB]
  • Database tables exported as TSV dump file [21MB]
  • Database tables exported as mysql dump file [9MB]
  • Peptide CDS and chromosomal coordinates [5MB]
  • Peptide CDS coordinates [3MB]
  • Peptide sequences in FASTA format [1MB]

Help

Complete description of each of the available download formats