About

The Borrelia burgdorferi PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets.

Available datasets from 3 different isolates (B31, MM1, and B31-5A4) of Borrelia burgdorferi were reprocessed from MS raw files using the Trans-Proteomic Pipeline suite of tools.

Explore

Publications

• Borrelia PeptideAtlas: A proteome resource of common Borrelia burgdorferi isolates for Lyme research; Reddy PJ, Sun Z, Wippel HH, Baxter DH, Swearingen K, Shteynberg DD, Midha MK, Caimano MJ, Strle K, Choi Y, Chan AP, Schork NJ, Varela-Stokes AS, Moritz RL.
  Sci Data. 2024 Dec 2;11(1):1313. doi: 10.1038/s41597-024-04047-9. PMID: 39622905; PMCID: PMC11612207.

Download

Below are individual Borrelia burgdorferi PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build. A build subtitled "PSM FDR=0.002" denotes a PSM FDR threshold of 0.002 (0.2%) is applied to every sample in the build.

Help

Complete description of each of the available download formats

Other Resources

• https://www.cdc.gov/lyme : Lyme Disease information at CDC

Acknowledgements

This work was funded in part by the National Institutes of Health grants from the National Institutes of Health, National Institute of Allergy and Infectious Diseases (NIAID) R21AI142302 and R21AI133335, National Institute for General Medical Sciences (NIGMS) R01GM087221, the Office of the Director S10OD026936, and the National Science Foundation award 1920268.

We thank the Wilke Family Foundation and the Steven and Alexandra Cohen Foundation for generous support.