PeptideAtlas: Home Overview Contacts Publications Software Database Schema Feedback Funding FAQ
Related: SRMAtlas PASSEL SWATHAtlas
Spectral Libs: Libraries + Info SpectraST Search
Glossary/Terms: Atlas nomenclature Protein ID terms
LOG IN
| 5 | datasets |
| 30 | experiments |
| 611 | MS runs |
| 1,116,244 | PSMs |
| 107,856 | distinct peptides |
| 1,444 | canonical proteins |
The Escherichia coli Phosphoproteome PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets.
Available phosphopeptide enrichment datasets of Escherichia coli were reprocessed from MS raw files using the Trans-Proteomic Pipeline suite of tools.
A publication describing the E coli Phospho PeptideAtlas build is in progress. For now, please just reference this URL, and check back later for a citation.
Below are individual Escherichia coli Phosphoproteome PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build. A build subtitled "PSM FDR=0.002" denotes a PSM FDR threshold of 0.002 (0.2%) is applied to every sample in the build.
Complete description of each of the available download formats