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Full 2013-07 Build Summary
12experiments
1,121,172PSMs
49,797distinct peptides
3,177canonical proteins

About

The Mycobacterium tuberculosis PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets.

Available datasets of Mycobacterium tuberculosis samples were reprocessed from the raw files using the Trans-Proteomic Pipeline suite of tools.

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Below are individual Mycobacterium tuberculosis PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build. A build subtitled "PSM FDR=0.002" denotes a PSM FDR threshold of 0.002 (0.2%) is applied to every sample in the build.

Mtuberculosis 2013-07 PSM FDR = 0.001Latest Build
  • Biosequence Set in FASTA format [2MB]
  • Database tables exported as an XML file [20MB]
  • Database tables exported as mysql dump file [10MB]
  • Peptide CDS and chromosomal coordinates [4MB]
  • Peptide CDS coordinates [1MB]
  • Peptide sequences in FASTA format [1MB]

Mtuberculosis 2013-05 PSM FDR = 0.0025
  • Biosequence Set in FASTA format [2MB]
  • Peptide CDS and chromosomal coordinates [4MB]
  • Peptide CDS coordinates [1MB]
  • Peptide sequences in FASTA format [1MB]
Mtuberculosis Synthetic 2013-05 PSM FDR = n/aDirty Peptide build
  • Biosequence Set in FASTA format [2MB]
  • Peptide CDS and chromosomal coordinates [1MB]
  • Peptide CDS coordinates [625KB]
  • Peptide sequences in FASTA format [441KB]
Mtuberculosis 2012-02 PSM FDR = 0.002
  • Biosequence Set in FASTA format [2MB]
  • Database tables exported as an XML file [26MB]
  • Database tables exported as mysql dump file [14MB]
  • Peptide CDS and chromosomal coordinates [4MB]
  • Peptide CDS coordinates [1MB]
  • Peptide sequences in FASTA format [1MB]
Mtuberculosis 2011-09 PSM FDR = 0.0025
  • Biosequence Set in FASTA format [2MB]
  • Database tables exported as an XML file [18MB]
  • Database tables exported as mysql dump file [6MB]
  • Peptide CDS and chromosomal coordinates [3MB]
  • Peptide CDS coordinates [1MB]
  • Peptide sequences in FASTA format [1MB]

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Complete description of each of the available download formats

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