1	dataset
2	experiments
155	MS runs
541,314	PSMs
88,095	distinct peptides
2,170	canonical proteins

About

The Mycobacterium tuberculosis Phosphoproteome PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets.

Available datasets of Mycobacterium tuberculosis Phosphoproteome samples were reprocessed from the raw files using the Trans-Proteomic Pipeline suite of tools.

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All detected canonical proteins

Publications

The Mycobacterium tuberculosis protein O-phosphorylation landscape
Frando A, Boradia V, Gritsenko M, Beltejar C, Day L, Sherman DR, Ma S, Jacobs JM, Grundner C.
Nat Microbiol. 2023 Mar;8(3):548-561
DOI: 10.1038/s41564-022-01313-7. Epub 2023 Jan 23. PMID: 36690861; PMCID: PMC11376436.

Download

Below are individual Mycobacterium tuberculosis Phosphoproteome PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build. A build subtitled "PSM FDR=0.002" denotes a PSM FDR threshold of 0.002 (0.2%) is applied to every sample in the build.

Mtuberculosis Phospho 2024-09 PSM FDR = 0.0003Latest Build

Biosequence Set in FASTA format [4MB]
Peptide CDS and chromosomal coordinates [1MB]
Peptide CDS coordinates [988KB]
Peptide sequences in FASTA format [642KB]

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Complete description of each of the available download formats