19	experiments
1,953,857	PSMs
57,747	distinct peptides
4,036	canonical proteins

About

The Pseudomonas aeruginosa PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets.

Available Pseudomonas aeruginosa datasets were reprocessed from the raw files using the Trans-Proteomic Pipeline suite of tools.

Explore

SEARCH(e.g. PA0004)

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Publication

Reales-Calderon et al., A wide-ranging Pseudomonas aeruginosa PeptideAtlas build: A useful proteomic resource for a versatile pathogen, Journal of Proteomics (2021)

Download

Below are individual Pseudomonas aeruginosa PeptideAtlas builds available for download in various flat file formats. Note that not all files contain all information from the build. A build subtitled "PSM FDR=0.002" denotes a PSM FDR threshold of 0.002 (0.2%) is applied to every sample in the build.

Pseudomonas aeruginosa 2021-01 PSM FDR = 0.0002Latest Build

Biosequence Set in FASTA format [4MB]
Peptide CDS and chromosomal coordinates [4MB]
Peptide CDS coordinates [2MB]
Peptide sequences in FASTA format [1MB]

Help

Complete description of each of the available download formats